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The Weddell Sea is of global importance in the formation of dense bottom waters associated with sea ice formation and ocean-ice sheet interaction occurring on the shelf areas. In this context, the Weddell Sea boundary current system (BCS) presents a major conduit for transporting relatively warm water to the Weddell Sea ice shelves and for exporting some modified form of Wedell Sea deep and bottom waters into the open ocean. This study investigates the downstream evolution of the structure and the seasonality of the BCS along the Weddell Sea continental slope, combining ocean data collected for the past two decades at three study locations. The interannual-mean geostrophic flow, which follows planetary potential vorticity contours, shifts from being surface intensified to bottom intensified along stream. The shift occurs due to the densification of water masses and the decreasing surface stress that occurs westward, toward the Antarctic Peninsula. A coherent along-slope seasonal acceleration of the barotropic flow exists, with maximum speed in austral autumn and minimum speed in austral summer. The barotropic flow significantly contributes to the seasonal variability in bottom velocity along the tip of the Antarctic Peninsula. Our analysis suggests that the winds on the eastern/northeastern side of the gyre determines the seasonal acceleration of the barotropic flow. In turn, they might control the export of Weddell Sea Bottom Water on seasonal time scales. The processes controlling the baroclinic seasonality of the flow need further investigation.

Polynyas are subject to variability in winds and ocean circulation and are important sites of ecological productivity. In February 2010, the B09B iceberg collided with the Mertz Glacier Tongue (MGT), calving a 78 × 40-km giant iceberg which modified the icescape and primary productivity of the Mertz polynya. In this study, we use satellite ocean color and sea ice concentration to investigate the variability, trends, and drivers of phytoplankton blooms in the Mertz polynya since 1997. During the bloom, over 21 years, we found (i) a later ice retreat time, (ii) an increase in sea ice concentration, (iii) a decrease in open-water period, (iv) a later bloom start, and (v) a decrease in bloom duration. Our results suggest that major postcalving changes in the physical characteristics of the polynya, mainly its icescape, are the primary drivers of phytoplankton phenology. More specifically, the MGT calving event resulted in significant seasonal and regional changes, with higher eastern chl-a and mean summer chl-a postcalving. While satellite data are useful to study long-term variability in these inhospitable areas, they only focus on the ocean surface and are obscured by ice and clouds. Additional subsurface parameters from seal tags, gliders and moorings in the southernmost polar regions would strengthen our comprehension of phytoplankton and physical changes in ocean dynamics that may have far-reaching consequences, from global circulation to carbon export.

Reliable records of Southern Ocean seawater palaeotemperatures are important because this region plays a significant role in regulating global climate change. Biomarkers such as GDGT-based indices have been effectively used to reconstruct seawater temperatures. We analysed the composition and distribution of iGDGTs, OH-GDGTs and brGDGTs and calculated GDGT-based temperature indices in surface sediments from Prydz Bay, East Antarctica. Our results showed that iGDGTs, OH-GDGTs and brGDGTs are all produced in situ, with iGDGTs and OH-GDGTs mostly synthesized by Thaumarchaeota. Concentrations of iGDGTs, OH-GDGTs and brGDGTs showed similar spatial distributions and decreased from the continental shelf towards the deep ocean. The highest concentrations were in the inner bay, which is attributed to a combination of (1) bathymetry that reduces water exchange, (2) the Prydz Bay Gyre stabilizing the upper water column and (3) sea ice that releases archaea and bacteria. Among the temperature indices based on iGDGTs, OH-GDGTs and combinations therein, those based on OH-GDGTs showed the strongest correlation with seawater temperature. Some OH-GDGT-based indices (e.g., OH-0/OHs, OH-1/OHs, OH-2/OHs and RI-OH′) exhibited a stronger correlation with annual subsurface ocean temperature (100–200 m), which may be related to archaeal habitats and production mechanisms. Our study suggests that RI-OH′ and OH-0/OHs could be used as indicators of annual subsurface ocean temperature in Antarctic marginal seas.

Knowledge of the health status and potential effect of disease outbreaks among Southern Ocean fauna may be decisive for its conservation. We assessed the exposure and infection of Antarctic fur seals (Arctocephalus gazella, AFS) and Southern elephant seals (Mirounga leonine, SES) to parapoxvirus, Phocid alphaherpesvirus-1 (PhHV-1), smooth Brucella spp. and Toxoplasma gondii. AFS (n = 65) serum and swab samples, and SES (n = 13) serum samples from the sub--Antarctic island of Bouvetøya (54°25’S, 03°22’E) were collected during two austral summers (2014/15, 2017/18). Three polymerase chain reaction (PCR) tests amplifying the DNA polymerase, B2L and GIF parapoxvirus genomic regions were performed, investigating DNA from mucosal swab samples. The glycoprotein B gene was targeted to detect PhHV-1 viral DNA. Sera were assayed for T. gondii and smooth Brucella spp. antibodies with indirect enzyme-linked immunosorbent assays. Parapoxvirus PCR amplicons of the expected size were generated in two of the 29 AFS pups (nasal swabs, 2014/15), targeting the B2L (n = 2) and DNA polymerase (n = 1) genes, whereas the GIF PCR did not amplify target sequences. The PCR amplicons were sequenced and blasted in GenBank, revealing highest similarity with a seal parapoxvirus, confirming the presence of the virus in AFS for the first time. No PhHV-1 amplicons were generated, and antibodies against T. gondii or smooth Brucella spp. were not detected. Our data indicate that these seals are host for parapoxvirus but are neither exposed to smooth Brucella spp. nor T. gondii. Evidence of PhHV-1 shedding was not detected.

In this article, we analyze the impacts of climate change on Antarctic marine ecosystems. Observations demonstrate large-scale changes in the physical variables and circulation of the Southern Ocean driven by warming, stratospheric ozone depletion, and a positive Southern Annular Mode. Alterations in the physical environment are driving change through all levels of Antarctic marine food webs, which differ regionally. The distributions of key species, such as Antarctic krill, are also changing. Differential responses among predators reflect differences in species ecology. The impacts of climate change on Antarctic biodiversity will likely vary for different communities and depend on species range. Coastal communities and those of sub-Antarctic islands, especially range-restricted endemic communities, will likely suffer the greatest negative consequences of climate change. Simultaneously, ecosystem services in the Southern Ocean will likely increase. Such decoupling of ecosystem services and endemic species will require consideration in the management of human activities such as fishing in Antarctic marine ecosystems.

The Retrospective Analysis of Antarctic Tracking Data (RAATD) is a Scientific Committee for Antarctic Research project led jointly by the Expert Groups on Birds and Marine Mammals and Antarctic Biodiversity Informatics, and endorsed by the Commission for the Conservation of Antarctic Marine Living Resources. RAATD consolidated tracking data for multiple species of Antarctic meso- and top-predators to identify Areas of Ecological Significance. These datasets and accompanying syntheses provide a greater understanding of fundamental ecosystem processes in the Southern Ocean, support modelling of predator distributions under future climate scenarios and create inputs that can be incorporated into decision making processes by management authorities. In this data paper, we present the compiled tracking data from research groups that have worked in the Antarctic since the 1990s. The data are publicly available through biodiversity.aq and the Ocean Biogeographic Information System. The archive includes tracking data from over 70 contributors across 12 national Antarctic programs, and includes data from 17 predator species, 4060 individual animals, and over 2.9 million observed locations.

The Filchner-Ronne Ice Shelf, fringing the southern Weddell Sea, is Antarctica's second largest ice shelf. At present, basal melt rates are low due to active dense water formation; however, model projections suggest a drastic increase in the future due to enhanced inflow of open-ocean warm water. Mooring observations from 2014 to 2016 along the eastern flank of the Filchner Trough (76°S) revealed a distinct seasonal cycle with inflow if Warm Deep Water during summer and autumn. Here we present extended time series showing an exceptionally warm and long inflow in 2017, with maximum temperatures exceeding 0.5°C. Warm temperatures persisted throughout winter, associated with a fresh anomaly, which lead to a change in stratification over the shelf, favoring an earlier inflow in the following summer. We suggest that the fresh anomaly developed upstream after anomalous summer sea ice melting and contributed to a shoaling of the shelf break thermocline.

The Southern Ocean is chronically undersampled due to its remoteness, harsh environment, and sea ice cover. Ocean circulation models yield significant insight into key processes and to some extent obviate the dearth of data; however, they often underestimate surface mixed layer depth (MLD), with consequences for surface water-column temperature, salinity, and nutrient concentration. In this study, a coupled circulation and sea ice model was implemented for the region adjacent to the West Antarctic Peninsula, a climatically sensitive region which has exhibited decadal trends towards higher ocean temperature, shorter sea ice season, and increasing glacial freshwater input, overlain by strong interannual variability. Hindcast simulations were conducted with different air-ice drag coefficients and Langmuir circulation parameterizations to determine the impact of these factors on MLD. Including Langmuir circulation deepened the surface mixed layer, with the deepening being more pronounced in the shelf and slope regions. Optimal selection of an air-ice drag coefficient also increased modeled MLD by similar amounts and had a larger impact in improving the reliability of the simulated MLD interannual variability. This study highlights the importance of sea ice volume and redistribution to correctly reproduce the physics of the underlying ocean, and the potential of appropriately parameterizing Langmuir circulation to help correct for biases towards shallow MLD in the Southern Ocean. The model also reproduces observed freshwater patterns in the West Antarctic Peninsula during late summer and suggests that areas of intense summertime sea ice melt can still show net annual freezing due to high sea ice formation during the winter.

Abstract Individual heterogeneity in diet and foraging behaviour is common in wild animal populations, and can be a strong determinant of how populations respond to environmental changes. Within populations, variation in foraging behaviour and the occurrence of individual tactics in relation to resources distribution can help explain differences in individual fitness, and ultimately identify important factors affecting population dynamics. We examined how foraging behaviour and habitat during the breeding period related to the physiological state of a long-ranging seabird adapted to sea ice, the Antarctic petrel Thalassoica antarctica. Firstly, using GPS tracking and state-switching movement modelling (hidden Markov models) on 124 individual birds, we tested for the occurrence of distinct foraging tactics within our study population. Our results highlight a large variation in the movement and foraging behaviour of a very mobile seabird, and delineate distinct foraging tactics along a gradient from foraging in dense pack ice to foraging in open water. Secondly, we investigated the effects of these foraging tactics on individual state at return from a foraging trip. We combined movement data with morphometric and physiological measurements of a suite of plasma metabolites that provided a general picture of a bird's individual state. Foraging in denser sea ice was associated with lower gain in body mass during brooding, as well as lower level of energy acquisition (plasma triacylglycerol) during both brooding and incubation. We found no clear relationship between the foraging tactic in relation to sea ice and the energetic stress (changes in plasma corticosterone), energetic balance (β-hydroxybutyrate) or trophic level (δ15N). However, a shorter foraging range was related to both the energetic balance (positively) and the trophic level (negatively). Our results highlight a diverse range of foraging tactics in relation to sea ice in Antarctic petrels. While the various foraging tactics do not seem to strongly alter energetic balance, they may affect other aspects of Antarctic petrels' physiology. Future changes in sea-ice habitats can thus be expected to have an impact on the individual state of seabirds such as Antarctic petrels, which could ultimately affect their population dynamics. Nonetheless, strong individual heterogeneity in the use of sea-ice habitats by a typical pagophilic species might strengthen its resilience to environmental changes and in particular to forecasted sea-ice loss. A free Plain Language Summary can be found within the Supporting Information of this article.

Microcontinents and continental fragments are small pieces of continental crust that are surrounded by oceanic lithosphere. Although classically associated with passive margin formation, here we present several preserved microcontinents and continental fragments associated with subduction systems. They are located in the Coral Sea, South China Sea, central Mediterranean and Scotia Sea regions, and a “proto-microcontinent,” in the Gulf of California. Reviewing the tectonic history of each region and interpreting a variety of geophysical data allows us to identify parameters controlling the formation of microcontinents and continental fragments in subduction settings. All these tectonic blocks experienced long, complex tectonic histories with an important role for developing inherited structures. They tend to form in back-arc locations and separate from their parent continent by oblique or rotational kinematics. The separated continental pieces and associated marginal basins are generally small and their formation is quick (<50 Myr). Microcontinents and continental fragments formed close to large continental masses tend to form faster than those created in systems bordered by large oceanic plates. A common triggering mechanism for their formation is difficult to identify, but seems to be linked with rapid changes of complex subduction dynamics. The young ages of all contemporary pieces found in situ suggest that microcontinents and continental fragments in these settings are short lived. Although presently the amount of in-situ subduction-related microcontinents is meager (an area of 0.56% and 0.28% of global, non-cratonic, continental crustal area and crustal volume, respectively), through time microcontinents contributed to terrane amalgamation and larger continent formation.

Winter to summer CO2 dynamics within landfast sea ice in McMurdo Sound (Antarctica) were investigated using bulk ice pCO2 measurements, air-snow-ice CO2 fluxes, dissolved inorganic carbon (DIC), total alkalinity (TA), and ikaite saturation state. Our results suggest depth-dependent biotic and abiotic controls that led us to discriminate the ice column in three layers. At the surface, winter pCO2 supersaturation drove CO2 release to the atmosphere while spring-summer pCO2 undersaturation led to CO2 uptake most of the time. CO2 fluxes showed a diel pattern superimposed upon this seasonal pattern which was potentially assigned to either ice skin freeze-thaw cycles or diel changes in net community production. In the ice interior, the pCO2 decrease across the season was driven by physical processes, mainly independent of the autotrophic and heterotrophic phases. Bottom sea ice was characterized by a massive biomass build-up counterintuitively associated with transient heterotrophic activity and nitrate plus nitrite accumulation. This inconsistency is likely related to the formation of a biofilm. This biofilm hosts both autotrophic and heterotrophic activities at the bottom of the ice during spring and may promote calcium carbonate precipitation.

Over seks tiår fylte glinsende fett fra hundretusenvis av hval råstoffbehov til multinasjonale konserners margarin- og såpeprodukter. Hoffleverandørene var norske hvalfangere. Fra spekkjelene like etter århundreskiftet ble fyrt opp på Sør-Georgia til det flytende kokeriet Kosmos IV ankret opp i Sandefjord på slutten av 1960-tallet, skulle hvalfangst dominere og forme utviklingen av finansmarked, konsumvarer og kapitalisme i Norge. Dette er en fortelling om eksplosivt voksende rikdom og merkevarebygging, men også en biologisk tragedie. Et nådeløst møte mellom jordens største dyr, effektiv fangsteknologi og konsumindustri. Dette er en flerfasettert historie om et kapitalfattig lands industrialisering, skattesky redere og multinasjonale fettkjemper, men også om ubegrensede offer og tap. Om norsk polarimperialisme og globalt salg utfordret av stormakter og skiftende konjunkturer. Dette er historien om "Den siste olje".

Global climate change is significantly affecting marine life off the northern tip of the Antarctic Peninsula, but little is known about microbial ecology in this area. The main goal of this study was to investigate the bacterioplankton community structure in surface waters using pyrosequencing and to determine factors influencing this community. Pelagibacterales and Rhodobacterales (Alphaproteobacteria), Oceanospirillales and Alteromonadales (Gammaproteobacteria), and Flavobacteriales (Bacteroidetes) were the core taxa in our samples, and the five most relatively abundant genera were Pelagibacter, Polaribacter, Octadecabacter, group HTCC2207 and Sulfitobacter. Although nutrients and chlorophyll a (chl a) contributed more to bacterioplankton community structure than water masses or depth, only 30.39% of the variance could be explained by the investigated environmental factors, as revealed by RDA and pRDA. No significant difference with respect to nutrients and chl a was observed among water masses or depth, as indicated by ANOVA. Furthermore, significant correlations among the dominant bacterial genera were more common than correlations between dominant genera and environmental factors, as revealed by Spearman analysis. We conclude that nutrients and chl a become homogeneous and that interpopulation interactions may have a central role in influencing the bacterial community structure in surface waters off the northern tip of the Antarctic Peninsula during the summer.

An urgent necessity to understand the effect of climatic change on scleractinian cold-water coral (CWC) ecosystems has arisen due to increasing ocean warming and acidification over the last decades. Here, presence-absence records of 12 scleractinian CWC species from research expeditions and the literature were compiled and merged with model-generated pseudo-absence data and 14 environmental variables. The best-fitting results of 9 species distribution models (SDMs) were combined to an ensemble habitat suitability model for CWCs in the northern Southern Ocean (Weddell Sea and Antarctic Peninsula) by means of the open-source R package "biomod2". Furthermore, 2 future scenarios of increasing bottom sea temperature were used to investigate the spatial response of scleractinians to temperature change. The resulting (current scenario) potential ecological niches were evaluated with good to excellent statistical measures. The results predict that present areas of highest probability of CWC occurrence are around the Antarctic Peninsula, South Orkney Islands and Queen Maud Land, with preference to geomorphic features such as seamounts. The distribution of CWC habitats is mainly driven by distance to coast and ice shelves, bathymetry, benthic calcium carbonate, and temperature. Under warming conditions, CWCs are predicted to expand their distribution range by 6 and 10% in 2037 and 2150, respectively, compared to the present distribution. The future models using increased bottom temperature revealed a stable CWC distribution for most parts of the study area. However, habitat shifts are expected to the Filchner Trough region, the adjacent continental shelves, as well as to the eastern side of the Antarctic Peninsula. KEYWORDS: Scleractinian coral · Ensemble models · Environmental change · Habitat suitability model · Spatial distribution · Weddell Sea. Antarctica

Antarctic fur seal (Arctocephalus gazella) colonies are found on sub-Antarctic islands around the continent. These islands experience a range of conditions in terms of physical and biological habitat, creating a natural laboratory to investigate local genetic adaptation. One striking habitat difference is in the availability of Euphausia superba krill as prey, which has led to A. gazella exhibiting a range of diets. A. gazella in some colonies consume exclusively krill, while their conspecifics in other colonies feed mainly on fish and consume few to no krill. To investigate potential adaptations to these different prey fields, reduced representation genome sequencing was conducted on A. gazella from the 8 major colonies. Twenty-seven genomic regions exhibiting signatures of natural selection were identified. Two of these genomic regions were clearly associated with seals living in krill-dominated areas or those in fish-dominated areas. Twenty-two additional genomic regions under selection showed a pattern consistent with prey differences as the driver of selection after historical migrations from krill-dominated habitats where lineages evolved to present krill-poor habitat areas were taken into account. Only 1 of the genomic regions identified appeared to be explained by any other environmental variable analysed (depth). Genomic regions under prey-driven selection included genes associated with regulation of gene expression, skeletal development, and lipid metabolism. Adaptation to local prey has implications for spatial management of this species and for the potential impacts of climate- or harvest-driven reductions in krill abundance on these seals. KEY WORDS: Arctocephalus gazella · Double digest restriction-site associated DNA sequencing · ddRAD · Diet · Euphausia superba · Natural selection

Surface layer and upper-air in situ observations from two research vessel cruises and an ice station in the Weddell Sea from 1992 and 1996 are used to validate four current atmospheric reanalysis products: ERA-Interim, CFSR, JRA-55, and MERRA-2. Three of the observation data sets were not available for assimilation, providing a rare opportunity to validate the reanalyses in the otherwise datasparse region of the Antarctic against independent data. All four reanalyses produce 2 m temperatures warmer than the observations, and the biases vary from +2.0 K in CFSR to +2.8 K in MERRA-2. All four reanalyses are generally too warm also higher up in the atmospheric boundary layer (ABL), with biases up to +1.4 K (ERA-Interim). Cloud fractions are relatively poorly reproduced by the reanalyses, MERRA-2 and JRA-55 having the strongest positive and negative biases of about +30 % and −17 %, respectively. Skill scores of the error statistics reveal that ERA-Interim compares generally the most favorably against both the surface layer and the upper-air observations. CFSR compares the second best and JRA-55 and MERRA-2 have the least favorable scores. The ABL warm bias is consistent with previous evaluation studies in high latitudes, where more recent observations have been applied. As the amount of observations has varied depending on the decade, season, and region, the consistency of the warm bias suggests a need to improve the modeling systems, including data assimilation as well as ABL and surface parameterizations.

The intertidal fauna of the Antarctic Peninsula has a relatively high species diversity, due to its warmer environment compared to other parts of Antarctica. Marine oligochaetes are, in general, one of the most diverse and ecologically important benthic organism groups, at least in the littoral zone. Antarctica has been one of the least studied areas with regard to oligochaete diversity. Here we report two Lumbricillus species (Lumbricillus antarcticus Stephenson, 1932 and Lumbricillus sejongensis sp. nov.) new to Antarctica, found in a tidal pool on the Barton Peninsula, King George Island. The diversity of this genus remains poorly known for Antarctica and the Subantarctic islands, and what we know is based on a few patchy studies.