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The McMurdo Dry Valleys are one of the most arid environments on Earth. Over the soil landscape for the majority of the year, biological and ecosystem processes in the dry valleys are constrained by the low temperatures and limited availability of water. The prevalence of these physical limitations in controlling biological and ecosystem processes makes the dry valleys a climatesensitive system, poised to experience substantial changes following projected future warming. Short-duration increases in summer temperatures are associated with pulses of water from melting ice reserves, including glaciers, snow and permafrost. Such pulses alter soil geochemistry by mobilizing and redistributing soil salts (via enhanced weathering, solubility and mobility), which can alter habitat suitability for soil organisms. Resulting changes in soil community composition or distribution may alter the biogeochemical processes in which they take part. Here, we review the potential impacts of meltwater pulses and present new field data documenting instances of meltwater pulse events that result from different water sources and hydrological patterns, and discuss their potential influence on soil biology and biogeochemistry. We use these examples to discuss the potential impacts of future climate change on the McMurdo Dry Valley soil ecosystem.Keywords: Water pulse; climate change; polar desert; International Polar Year; discrete warming events; soil biogeochemistry.

The contamination of polar regions with mercury that is transported from lower latitudes as inorganic mercury has resulted in the accumulation of methylmercury (MeHg) in food chains, risking the health of humans and wildlife. While production of MeHg has been documented in polar marine and terrestrial environments, little is known about the responsible transformations and transport pathways and the processes that control them. We posit that as in temperate environments, microbial transformations play a key role in mercury geochemical cycling in polar regions by: (1) methylating mercury by one of four proposed pathways, some not previously described; (2) degrading MeHg by activities of mercury resistant and other bacteria; and (3) carrying out redox transformations that control the supply of the mercuric ion, the substrate of methylation reactions. Recent analyses have identified a high potential for mercury-resistant microbes that express the enzyme mercuric reductase to affect the production of gaseous elemental mercury when and where daylight is limited. The integration of microbially mediated processes in the paradigms that describe mercury geochemical cycling is therefore of high priority especially in light of concerns regarding the effect of global warming and permafrost thawing on input of MeHg to polar regions. Keywords: Microbiology; mercury biogeochemistry; redox transformations; polar regions; methylation

The phytoplankton onset following the spring ice break-up in Adélie Land, East Antarctica, was studied along a short transect, from 400 m off the continent to 5 km offshore, during the austral summer of 2002. Eight days after the ice break-up, some large colonial and solitary diatom cells, known to be associated with land-fast ice and present in downward fluxes, were unable to adapt in ice-free waters, while some other solitary and short-colony forming taxa (e.g., Fragilariopsis curta, F. cylindrus) did develop. Pelagic species were becoming more abundant offshore, replacing the typical sympagic (ice-associated) taxa. Archaeomonad cysts, usually associated with sea ice, were recorded in the surface waters nearshore. Rough weather restricted the data set, but we were able to confirm that some microalgae may be reliable sea-ice indicators and that seeding by sea ice only concerns a few taxa in this coastal area of East Antarctica. Keywords: Ice break-up; phytoplankton; sea-ice signature; East Antarctica

As part of the US-AMLR program in January-February of 2006, 99 stations in the South Shetland Islands-Antarctic Peninsula region were sampled to understand the variability in hydrographic and biological properties related to the abundance and distribution of krill in this area. Concentrations of dissolved iron (DFe) and total acid-leachable iron (TaLFe) were measured in the upper 150 m at 16 of these stations (both coastal and pelagic waters) to better resolve the factors limiting primary production in this area and in downstream waters of the Scotia Sea. The concentrations of DFe and TaLFe in the upper mixed layer (UML) were relatively high in Weddell Sea Shelf Waters (~0.6 nM and 15 nM, respectively) and low in Drake Passage waters (~0.2 nM and 0.9 nM, respectively). In the Bransfield Strait, representing a mixture of waters from the Weddell Sea and the Antarctic Circumpolar Current (ACC), concentrations of DFe were ~0.4 nM and of TaLFe ~1.7 nM. The highest concentrations of DFe and TaLFe in the UML were found at shallow coastal stations close to Livingston Island (~1.6 nM and 100 nM, respectively). The ratio of TaLFe:DFe varied with the distance to land: ~45 at the shallow coastal stations, ~15 in the high-salinity waters of Bransfield Strait, and ~4 in ACC waters. Concentrations of DFe increased slightly with depth in the water column, while that of TaLFe did not show any consistent trend with depth. Our Fe data are discussed in regard to the hydrography and water circulation patterns in the study area, and with the hypothesis that the relatively high rates of primary production in the central regions of the Scotia Sea are partially sustained by natural iron enrichment resulting from a northeasterly flow of iron-rich coastal waters originating in the South Shetland Islands-Antarctic Peninsula region.

The carbon cycle is a major forcing component in the global climate system. Modelling studies, aiming to explain recent and past climatic changes and to project future ones, increasingly include the interaction between the physical and biogeochemical systems. Their ocean components are generally z-coordinate models that are conceptually easy to use but that employ a vertical coordinate that is alien to the real ocean structure. Here, we present first results from a newly-developed isopycnic carbon cycle model and demonstrate the viability of using an isopycnic physical component for this purpose. As expected, the model represents well the interior ocean transport of biogeochemical tracers and produces realistic tracer distributions. Difficulties in employing a purely isopycnic coordinate lie mainly in the treatment of the surface boundary layer which is often represented by a bulk mixed layer. The most significant adjustments of the ocean biogeochemistry model HAMOCC, for use with an isopycnic coordinate, were in the representation of upper ocean biological production. We present a series of sensitivity studies exploring the effect of changes in biogeochemical and physical processes on export production and nutrient distribution. Apart from giving us pointers for further model development, they highlight the importance of preformed nutrient distributions in the Southern Ocean for global nutrient distributions. The sensitivity studies show that iron limitation for biological particle production, the treatment of light penetration for biological production, and the role of diapycnal mixing result in significant changes of nutrient distributions and liniting factors of biological production.

The basal regions of continental ice sheets are gaps in our current understanding of the Earth's biosphere and biogeochemical cycles. We draw on existing and new chemical data sets for subglacial meltwaters to provide the first comprehensive assessment of sub-ice sheet biogeochemical weathering. We show that size of the ice mass is a critical control on the balance of chemical weathering processes and that microbial activity is ubiquitous in driving dissolution. Carbonate dissolution fueled by sulfide oxidation and microbial CO2 dominate beneath small valley glaciers. Prolonged meltwater residence times and greater isolation characteristic of ice sheets lead to the development of anoxia and enhanced silicate dissolution due to calcite saturation. We show that sub-ice sheet environments are highly geochemically reactive and should be considered in regional and global solute budgets. For example, calculated solute fluxes from Antarctica (72–130 t yr−1) are the same order of magnitude as those from some of the world's largest rivers and rates of chemical weathering (10–17 t km−2 yr−1) are high for the annual specific discharge (2.3–4.1 × 10−3 m). Our model of chemical weathering dynamics provides important information on subglacial biodiversity and global biogeochemical cycles and may be used to design strategies for the first sampling of Antarctic Subglacial Lakes and other sub-ice sheet environments for the next decade.

In the Southern Ocean near the Antarctic Peninsula, Antarctic Circumpolar Current (ACC) fronts interact with shelf waters facilitating lateral transport of shelf-derived components such as iron into high-nutrient offshore regions. To trace these shelf-derived components and estimate lateral mixing rates of shelf water, we used naturally occurring radium isotopes. Short-lived radium isotopes were used to quantify the rates of shelf water entrainment while Fe/228Ra ratios were used to calculate the Fe flux. In the summer of 2006 we found rapid mixing and significant lateral iron export, namely, a dissolved iron flux of 1.1 × 105 mol d−1 and total acid leachable iron flux of 1.1 × 106 mol d−1 all of which is transported in the mixed layer from the shelf region offshore. This dissolved iron flux is significant, especially considering that the bloom observed in the offshore region (0.5–2 mg chl a m−3) had an iron demand of 1.1 to 4 × 105 mol Fe. Net vertical export fluxes of particulate Fe derived from 234Th/238U disequilibrium and Fe/234Th ratios accounted for only about 25% of the dissolved iron flux. On the other hand, vertical upward mixing of iron rich deeper waters provided only 7% of the lateral dissolved iron flux. We found that similarly to other studies in iron-fertilized regions of the Southern Ocean, lateral fluxes overwhelm vertical inputs and vertical export from the water column and support significant phytoplankton blooms in the offshore regions of the Drake Passage.

Investigations into Fe(II) cycling during two Southern Ocean mesoscale iron enrichment experiments, SOFeX and EIFeX, clearly show the importance of Fe(II) to iron speciation during these experiments. In both cases the added Fe(II) persisted significantly longer than its expected oxidation time indicating a significant Fe reduction process at work. During EIFeX diel studies showed a strong photochemically induced cycle in Fe(II) production in sunlit surface waters. Our results suggest that the photochemical cycling of iron may also be important in unfertilized waters of the Southern Ocean.

This study explores the changes in the surface water fugacity of carbon dioxide (fCO2) and biological carbon uptake in two Southern Ocean iron fertilisation experiments with different hydrographic regimes. The Southern Ocean Iron Release Experiment (SOIREE) experiment was carried out south of the Antarctic Polar Front (APF) at 61°S, 141°E in February 1999 in a stable hydrographic setting. The EisenEx experiment was conducted in a cyclonic eddy north of the APF at 48°S, 21°E in November 2000 and was characterised by a rapid succession of low to storm-force wind speeds and dynamic hydrographic conditions. The iron additions promoted algal blooms in both studies. They alleviated algal iron limitation during the 13-day SOIREE experiment and probably during the first 12 days of EisenEx. The fCO2 in surface water decreased at a constant rate of 3.8μatmday−1 from 4 to 5 days onwards in SOIREE. The fCO2 reduction was 35μatm after 13 days. The evolution of surface water fCO2 in the iron-enriched waters (or ‘patch’) displayed a saw tooth pattern in EisenEx, in response to algal carbon uptake in calm conditions and deep mixing and horizontal dispersion during storms. The maximum fCO2 reduction was 18–20μatm after 12 and 21 days with lower values in between. The iron-enriched waters in EisenEx absorbed four times more atmospheric CO2 than in SOIREE between 5 and 12 days, as a result of stronger winds. The total biological uptake of inorganic carbon across the patch was 1389ton C (±10%) in SOIREE and 1433ton C (±27%) in EisenEx after 12 days (1ton=106g). This similarity probably reflects the comparable size of the iron additions, as well as algal growth at a similar near-maximum growth rate in these regions. The findings imply that the different mixing regimes had less effect on the overall biological carbon uptake across the iron-enriched waters than suggested by the evolution of fCO2 in surface water.

The distribution and speciation of iron was determined along a transect in the eastern Atlantic sector (6°E) of the Southern Ocean during a collaborative Scandinavian/South African Antarctic cruise conducted in late austral summer (December 1997/January 1998). Elevated concentrations of dissolved iron (>0.4nM) were found at 60°S in the vicinity of the Spring Ice Edge (SIE) in tandem with a phytoplankton bloom, chiefly dominated by Phaeocystis sp. This bloom had developed rapidly after the loss of the seasonal sea ice cover. The iron that fuelled this bloom was mostly likely derived from sea ice melt. In the Winter Ice Edge (WIE), around 55°S, dissolved iron concentrations were low (<0.2nM) and corresponded to lower biological productivity, biomass. In the Antarctic Polar Front, at approximately 50°S, a vertical profile of dissolved iron showed low concentrations (<0.2nM); however, a surface survey showed higher concentrations (1–3nM), and considerable patchiness in this dynamic frontal region. The chemical speciation of iron was dominated by organic complexation throughout the study region. Organic iron-complexing ligands ([L]) ranged from 0.9 to 3.0nM Fe equivalents, with complex stability logKFeL′=21.4–23.5. Estimated concentrations of inorganic iron (Fe′) ranged from 0.03 to 0.79pM, with the highest values found in the Phaeocystis bloom in the SIE. A vertical profile of iron-complexing ligands in the WIE showed a maximum consistent with a biological source for ligand production and near surface minimum possibly consistent with loss via photodecomposition. This work further confirms the role iron that has in the Southern Ocean in limiting primary productivity.

A suite of standard ocean hydrographic and circulation metrics are applied to the equilibrium physical solutions from 13 global carbon models participating in phase 2 of the Ocean Carbon-cycle Model Intercomparison Project (OCMIP-2). Model-data comparisons are presented for sea surface temperature and salinity, seasonal mixed layer depth, meridional heat and freshwater transport, 3-D hydrographic fields, and meridional overturning. Considerable variation exists among the OCMIP-2 simulations, with some of the solutions falling noticeably outside available observational constraints. For some cases, model-model and model-data differences can be related to variations in surface forcing, subgrid-scale parameterizations, and model architecture. These errors in the physical metrics point to significant problems in the underlying model representations of ocean transport and dynamics, problems that directly affect the OCMIP predicted ocean tracer and carbon cycle variables (e.g., air-sea CO2 flux, chlorofluorocarbon and anthropogenic CO2 uptake, and export production). A substantial fraction of the large model-model ranges in OCMIP-2 biogeochemical fields (±25–40%) represents the propagation of known errors in model physics. Therefore the model-model spread likely overstates the uncertainty in our current understanding of the ocean carbon system, particularly for transport-dominated fields such as the historical uptake of anthropogenic CO2. A full error assessment, however, would need to account for additional sources of uncertainty such as more complex biological-chemical-physical interactions, biases arising from poorly resolved or neglected physical processes, and climate change.

We have investigated the intermediate water mass of the central Weddell Gyre using TCO2 and oxygen data of FS Polarstern cruises in 1992, 1996 and 1998. This water mass, designated as Central Intermediate Water (CIW), is enriched in CO2 and depleted in O-2 relative to its source water due to biological degradation. CO2 enrichment and O-2 depletion were quantified by calculating the difference between the concentrations in the CIW and those in the, more southern source water, the Circumpolar Deep Water, which derives from the Antarctic Circumpolar Current. Inventories of enrichment and depletion were determined over the whole depth range of CIW, i.e. about 200800 m. The O-2 depletion inventory was greater than that of TCO2 enrichment which is in line with a biological origin of the signal. Spatial and interannual variation appeared to be small. Because subsurface remineralization in the central Weddell Gyre is largely restricted to the CIW, the export production estimate from previous work has been applied to compute the renewal time of CIW from these inventories. A renewal time of only three years was found. TCO2- and O-2-based computations were consistent, the former showing larger variation, though. From renewal time and volume of the CIW, a transport velocity (renewal rate) of 6-7 Sv was obtained. Of this, about I Sv is upwelled into the surface layer. The remaining 5-6 Sv CIW must be exported to the north, which is opposite to previous views. Results of water mass age and transport rate have thus been obtained using a method based on biogeochemical parameters. As the CIW cannot be identified by temperature and salinity, nor with transient tracers because it is hardly ventilated, this is the only way to obtain such results. As part of the CIW export, a large amount of remineralized CO2 enters the abyssal oceans where it is sequestered for long periods of time. The CIW is a principal and highly efficient player in the biological pump mechanism of the Southern Ocean.

The sea ice does not only determine the ecology of ice biota, but it also influences the pelagic systems under the ice cover and at ice edges. In this paper, new estimates of Arctic and Antarctic production of biogenic carbon are derived, and differences as well as similarities between the two oceans are examined. In ice-covered seas, high algal concentrations (blooms) occur in association with several types of conditions. Blooms often lead to high sedimentation of intact cells and faecal pellets. In addition to ice-related blooms, there is progressive accumulation of organic matter in Arctic multi-year ice, whose fate may potentially be similar to that of blooms. A fraction of the carbon fixed by microalgae that grow in sea ice or in relation to it is exported out of the production zone. This includes particulate material sinking out of the euphotic zone, and also material passed on to the food web. Pathways through which ice algal production does reach various components of the pelagic and benthic food webs, and through them such top predators as marine mammals and birds, are discussed. Concerning global climate change and biogeochemical fluxes of carbon, not all export pathways from the euphotic zone result in the sequestration of carbon for periods of hundreds of years or more. This is because various processes, that take place in both the ice and the water column, contribute to mineralize organic carbon into CO2 before it becomes sequestered. Processes that favour the production and accumulation of biogenic carbon as well as its export to deep waters and sequestration are discussed, together with those that influence mineralization in the upper ice-covered ocean.